io.get_roi
io.get_roi(zarr_url, roi_table, level=0)
Get the zarr path and pixel indices for the selected well at a given resolution level
Parameters
| Name | Type | Description | Default |
|---|---|---|---|
zarr_url |
str | Path to the OME-ZARR | required |
roi_table |
str | Name of the ROI table | required |
level |
int | Resolution level (0 = original, not downsampled resolution level) | 0 |
Returns
| Type | Description |
|---|---|
| tuple[Path, pd.DataFrame] | Tuple of zarr url and dataframe with start and end pixel indices (s_z, e_z, s_y, e_y, s_x, e_x) |