io.load_intensity_roi
io.load_intensity_roi(roi_url, roi_idx, roi=0, channel=0, timepoint=0)
Load the intensity array of the selected ROI
Parameters
| Name | Type | Description | Default |
|---|---|---|---|
roi_url |
Path | zarr url to the selected ROI | required |
roi_idx |
pd.DataFrame | Dataframe with the x/yZ start and end indices | required |
roi |
int | Index of the ROI in the selected well | 0 |
channel |
int | Channel index | 0 |
timepoint |
int | Timepoint index | 0 |
Returns
| Type | Description |
|---|---|
| np.ndarray | Numpy array with the ROI intensities |